HLA-A25
HLA-A25 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
(MHC Class I, A cell surface antigen) | ||||||||||||||||
About | ||||||||||||||||
Protein | transmembrane receptor/ligand | |||||||||||||||
Structure | αβ heterodimer | |||||||||||||||
Subunits | HLA-A*2501, β2-microglobulin | |||||||||||||||
Older names | A10 | |||||||||||||||
Subtypes | ||||||||||||||||
| ||||||||||||||||
Alleles link-out to IMGT/HLA database at EBI |
HLA-A25 (A25) is a human leukocyte antigen serotype within HLA-A serotype group. The serotype is determined by the antibody recognition of α25 subset of HLA-A α-chains. For A25, the alpha "A" chain are encoded by the HLA-A*25 allele group and the β-chain are encoded by B2M locus.[1] This group currently is dominated by A*2501. A25 and A*25 are almost synonymous in meaning. A25 is a split antigen of the broad antigen serotype A10. A25 is a sister serotype of A26, A34, A43, and A66.
A25 is more common in SW Asia to NW Europe. A25 is believed to have been formed by a single gene conversion between another HLA-A and the A*2601 allele.[2].
Serotype
[edit]A*25 | A25 | A10 | Sample |
allele | % | % | size (N) |
*2501 | 95 | 2 | 1375 |
A25 reasonably good serotyping with no overt false recognition..
A25 frequencies
[edit]Study population | Freq. (in %)[4] |
---|---|
Saudi Arabia | 5.7 |
India Jalpaiguri Toto | 5.1 |
Russia Northwest | 5.1 |
Serbia | 4.8 |
Spain Pas Valley | 4.3 |
Czech Republic | 4.2 |
Spain North Cantabrian | 4.2 |
Russia Arkhangelsk Pomors | 4.0 |
Spain North Cabuernigo | 3.8 |
Ireland South | 3.6 |
Romanian | 3.5 |
USA Caucasians (3) | 3.4 |
Croatia | 3.0 |
Bulgaria | 2.7 |
Spain Basque Arratia Vall… | 2.7 |
Sweden Uppsala County | 2.5 |
Scotland Orkney | 2.5 |
German Essen | 2.4 |
Wales | 2.1 |
Argentina Buenos Aires | 2.0 |
Ireland Northern | 2.0 |
Morocco | 2.0 |
Spain Eastern Andalusia | 2.0 |
Australia New South Wales | 1.9 |
Georgia Svaneti Svans | 1.9 |
Italy | 1.9 |
Macedonia | 1.9 |
Sweden Stockholm | 1.9 |
England Liverpool | 1.9 |
Azores Central Islands | 1.8 |
Turkey | 1.8 |
England Lancaster | 1.8 |
England Sheffield | 1.6 |
Israeli Jews | 1.5 |
Spain Basque Gipuzkoa Pro… | 1.5 |
Italy South Campania | 1.2 |
New Caledonia | 1.2 |
Uganda Kampala | 1.2 |
Australia West | 1.1 |
Finland | 1.1 |
Portugal Centre (2) | 1.1 |
Spain Catalonia Girona | 1.1 |
Belgium | 1.0 |
France Corsica | 1.0 |
Mongolia Oold | 1.0 |
Russia Murmansk Saomi | 1.0 |
Russia Sakhalin Island Ni… | 0.9 |
France South East | 0.8 |
USA South Texas Hispanics | 0.8 |
Morocco 'Berber' Nador Me… | 0.7 |
USA South Dakota Lakota S… | 0.7 |
Greece | 0.6 |
USA Arizona Pima | 0.6 |
Algeria1 | 0.5 |
China Qinghai Hui | 0.5 |
Allele frequencies presented, only |
A*2501 distribution is primarily located in Western Eurasia. Frequency tends to be highest in the populations that underwent later neolithization suggesting A*2501 spread in Europe. The high frequency in Saudi Arabia is suggestive of a source.
References
[edit]- ^ Arce-Gomez B, Jones EA, Barnstable CJ, Solomon E, Bodmer WF (February 1978). "The genetic control of HLA-A and B antigens in somatic cell hybrids: requirement for beta2 microglobulin". Tissue Antigens. 11 (2): 96–112. doi:10.1111/j.1399-0039.1978.tb01233.x. PMID 77067.
- ^ Madrigal JA, Hildebrand WH, Belich MP, et al. (1993). "Structural diversity in the HLA-A10 family of alleles: correlations with serology". Tissue Antigens. 41 (2): 72–80. doi:10.1111/j.1399-0039.1993.tb01982.x. PMID 8475492.
- ^ Allele Query Form IMGT/HLA - European Bioinformatics Institute
- ^ Middleton, D.; Menchaca, L.; Rood, H.; Komerofsky, R. (2003). "New allele frequency database: http://www.allelefrequencies.net". Tissue Antigens. 61 (5): 403–407. doi:10.1034/j.1399-0039.2003.00062.x. PMID 12753660.