Comparative proteomic analysis of supportive and unsupportive extracellular matrix substrates for human embryonic stem cell maintenance (Q24339581)

20 October 2023

Adam Byron

Adam

Byron

1 reference

20 October 2023

Jonathan D Humphries

Jonathan D

Humphries

1 reference

20 October 2023

Susan J Kimber

Susan J

Kimber

1 reference

20 October 2023

Martin J Humphries

Martin J

Humphries

1 reference

20 October 2023

Despina Soteriou

Despina

Soteriou

1 reference

20 October 2023

Banu Iskender

Banu

Iskender

1 reference

20 October 2023

Marie-Claire Haddock

Marie-Claire

Haddock

1 reference

20 October 2023

Melissa A Baxter

Melissa A

Baxter

1 reference

20 October 2023

David Knight

David

Knight

1 reference

Journal of Biological Chemistry

20 October 2023

language of work or name

English

0 references

publication date

28 June 2013

0 references

published in

0 references

volume

288

0 references

issue

0 references

page(s)

18716-31

0 references

describes a project that uses

Cytoscape

object named as

Cytoscape

2 references

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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19 March 2017

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19 March 2017

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A model for random sampling and estimation of relative protein abundance in shotgun proteomics

19 March 2017

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Laminin E8 fragments support efficient adhesion and expansion of dissociated human pluripotent stem cells

10 May 2017

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Fibrillin-1 mutations causing Weill-Marchesani syndrome and acromicric and geleophysic dysplasias disrupt heparan sulfate interactions

27 September 2017

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Mass spectrometry-based proteomic analysis of the matrix microenvironment in pluripotent stem cell culture.

27 September 2017

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Endogenous production of fibronectin is required for self-renewal of cultured mouse embryonic stem cells

27 September 2017

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27 September 2017

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Proteomic analysis of integrin adhesion complexes

27 September 2017

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27 September 2017

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27 September 2017

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27 September 2017

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Derivation of Man-1 and Man-2 research grade human embryonic stem cell lines

27 September 2017

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Improved membrane proteomics coverage of human embryonic stem cells by peptide IPG-IEF.

27 September 2017

1 reference

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QuickGO: a web-based tool for Gene Ontology searching

27 September 2017

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Molecular interplay between endostatin, integrins, and heparan sulfate.

27 September 2017

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Analysis of the distinct functions of growth factors and tissue culture substrates necessary for the long-term self-renewal of human embryonic stem cell lines

27 September 2017

1 reference

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Proteomics and human embryonic stem cells

27 September 2017

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27 September 2017

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The GOA database in 2009--an integrated Gene Ontology Annotation resource

27 September 2017

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Heparin promotes the growth of human embryonic stem cells in a defined serum-free medium

27 September 2017

1 reference

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Analysis and validation of proteomic data generated by tandem mass spectrometry

27 September 2017

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Fibrillin-1 regulates the bioavailability of TGFbeta1.

27 September 2017

1 reference

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Molecular mechanisms involved in self-renewal and pluripotency of embryonic stem cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Defined culture conditions of human embryonic stem cells

27 September 2017

1 reference

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Activin A maintains self-renewal and regulates fibroblast growth factor, Wnt, and bone morphogenic protein pathways in human embryonic stem cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Human embryonic stem cells: biology and clinical implications.

27 September 2017

1 reference

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Human embryonic stem cells derived without feeder cells.

27 September 2017

1 reference

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Noggin and bFGF cooperate to maintain the pluripotency of human embryonic stem cells in the absence of feeder layers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

An autogeneic feeder cell system that efficiently supports growth of undifferentiated human embryonic stem cells.

27 September 2017

1 reference

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A proteome analysis of conditioned media from human neonatal fibroblasts used in the maintenance of human embryonic stem cells

27 September 2017

1 reference

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Immortalized fibroblast-like cells derived from human embryonic stem cells support undifferentiated cell growth.

27 September 2017

1 reference

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The stem cell niche: theme and variations

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

The potential for proteomic definition of stem cell populations

27 September 2017

1 reference

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Feeder layer- and serum-free culture of human embryonic stem cells

27 September 2017

1 reference

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Comparative evaluation of various human feeders for prolonged undifferentiated growth of human embryonic stem cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Establishment and maintenance of human embryonic stem cells on STO, a permanently growing cell line

27 September 2017

1 reference

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A culture system using human foreskin fibroblasts as feeder cells allows production of human embryonic stem cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Proteome analysis of conditioned medium from mouse embryonic fibroblast feeder layers which support the growth of human embryonic stem cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Feeder-free growth of undifferentiated human embryonic stem cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Derivation, propagation and controlled differentiation of human embryonic stem cells in suspension.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

PRIDE Converter: making proteomics data-sharing easy

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Perlecan, basal lamina proteoglycan, promotes basic fibroblast growth factor-receptor binding, mitogenesis, and angiogenesis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Specific binding of basic fibroblast growth factor to basement membrane-like structures and to purified heparan sulfate proteoglycan of the EHS tumor.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

SnapShot: Protein-Protein Interaction Networks

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Characterization of human fibroblast-derived extracellular matrix components for human pluripotent stem cell propagation

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Phosphoproteomic analysis of human embryonic stem cells

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Identification of a membrane proteomic signature for human embryonic stem cells independent of culture conditions.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Feeder-free maintenance of hESCs in mesenchymal stem cell-conditioned media: distinct requirements for TGF-beta and IGF-II.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Integrated network analysis platform for protein-protein interactions

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Recombinant vitronectin is a functionally defined substrate that supports human embryonic stem cell self-renewal via alphavbeta5 integrin

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Lineage-specific reprogramming as a strategy for cell therapy

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Computing topological parameters of biological networks.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Identification of potential pluripotency determinants for human embryonic stem cells following proteomic analysis of human and mouse fibroblast conditioned media

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Identification of proteins from feeder conditioned medium that support human embryonic stem cells

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Correlation of Relative Abundance Ratios Derived from Peptide Ion Chromatograms and Spectrum Counting for Quantitative Proteomic Analysis Using Stable Isotope Labeling

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Activin A maintains pluripotency of human embryonic stem cells in the absence of feeder layers

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

TGFbeta/activin/nodal signaling is necessary for the maintenance of pluripotency in human embryonic stem cells

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Functional and topological characterization of protein interaction networks

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3696646

Laminin-511 expression is associated with the functionality of feeder cells in human embryonic stem cell culture

29 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23658023

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Proteomic analysis of membrane proteins expressed specifically in pluripotent murine embryonic stem cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/23658023

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M113.463372

1 reference

release_dawxkfv4xbdovamipoaf4cil7m

Fatcat ID

0 references

1 reference

1 reference

1 reference