6M02

cryo-EM structure of human Pannexin 1 channel

PDB DOI: https://doi.org/10.2210/pdb6M02/pdb
EM Map EMD-30028: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Homo sapiens
Expression System: Eukaryota sp.
Mutation(s): No
Membrane Protein: Yes OPMPDBTM

Deposited: 2020-02-19 Released: 2020-03-25
Deposition Author(s): Ronggui, Q., Lili, D., Jilin, Z., Xuekui, Y., Lei, W., Shujia, Z.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.20 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Cryo-EM structure of human heptameric Pannexin 1 channel.

Qu, R., Dong, L., Zhang, J., Yu, X., Wang, L., Zhu, S.

(2020) Cell Res 30: 446-448

PubMed: 32203128 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1038/s41422-020-0298-5
Primary Citation of Related Structures:
6M02

Organizational Affiliation

Institute of Pediatrics, Children's Hospital of Fudan University and Institutes of Biomedical Sciences, State Key Laboratory of Genetic Engineering and School of Life Sciences, Fudan University, Shanghai, 200032, China.

Macromolecule Content

Total Structure Weight: 336.66 kDa
Atom Count: 18,935
Modelled Residue Count: 2,345
Deposited Residue Count: 2,982
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pannexin-1	A, B, C, D, E A, B, C, D, E, F, G	426	Homo sapiens	Mutation(s): 0 Gene Names: PANX1, MRS1, UNQ2529/PRO6028 Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for Q96RD7 (Homo sapiens) Explore Q96RD7 Go to UniProtKB: Q96RD7
PHAROS: Q96RD7 GTEx: ENSG00000110218
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q96RD7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.20 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2020-03-25

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History (Full details and data files)

Version 1.0: 2020-03-25
Type: Initial release
Version 1.1: 2020-04-08
Changes: Database references
Version 1.2: 2020-05-27
Changes: Database references
Version 1.3: 2024-11-13
Changes: Data collection, Database references, Structure summary